Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs10005638 chr4:9653852 C/A 9.25E-9 117 40.67 42.9 12.63 KM Plot
THYM rs10007313 chr4:9611894 T/G 9.25E-9 117 40.67 42.9 12.63 KM Plot
THYM rs10010131 chr4:6292915 A/G 1.25E-6 119 25.83 38.58 50.13 KM Plot
THYM rs10012476 chr4:143390910 A/G 0.000191 119 38.58 46.6 18.42 KM Plot
THYM rs10015184 chr4:143370106 C/T 0.000185 119 38.33 46.43 18.42 KM Plot
THYM rs10016157 chr4:6294414 T/C 1.43E-6 118 25.83 38.58 50.1 KM Plot
THYM rs10025990 chr4:187146258 T/C 1.5E-8 118 12.63 45.58 40.67 KM Plot
THYM rs10026334 chr4:6294607 G/A 1.43E-6 118 25.83 38.58 50.1 KM Plot
THYM rs10029398 chr4:9650482 G/C 9.25E-9 117 40.67 42.9 12.63 KM Plot
THYM rs10032063 chr4:9650944 G/A 9.25E-9 117 40.67 42.9 12.63 KM Plot
THYM rs10033577 chr4:187132520 C/T 1.1E-8 119 12.63 36.63 42.82 KM Plot
THYM rs10034929 chr4:9602625 A/C 7.93E-9 118 41.22 42.9 12.63 KM Plot
THYM rs10063270 chr5:180118217 A/G 0 119 4.13 32.7 45.87 KM Plot
THYM rs10069994 chr5:180119677 C/T 0 117 46.27 32.7 4.13 KM Plot
THYM rs10073529 chr5:180120738 C/G 0 118 46.27 30.27 4.13 KM Plot